Overview
1
Project Management
1.1
Google Calendar
1.1.1
Setting Out of Office Notifications
1.1.2
Adding Other Calendars
1.1.3
Scheduling Rooms
1.2
Meetings
1.2.1
Teams
1.2.2
Zoom (template)
1.2.3
Making Scheduling Easier
1.2.4
Being an Effective Communicator on Zoom…
1.3
Slack
1.3.1
Slack Basics
1.3.2
Creating a Channel
1.3.3
Helpful Terminology
1.3.4
Getting to Know the
Workspace
1.3.5
Customizing your Project Base
1.4
OneDrive Shared Drive
1.4.1
Sharing Files
1.4.2
Other Considerations
1.5
Git and GitHub
1.5.1
What are Git and GitHub?
1.5.2
Helpful Terminology
1.5.3
How to Install Git and GitHub
1.5.4
General Guidelines for using GitHub at
1.6
Zotero
1.6.1
Making
the Owner of a Library
1.6.2
Saving Publications to a Library
1.6.3
Zotero Integration with GoogleDocs and Word
2
File Structure
2.1
Folder Naming
2.2
Shared Drive Files
2.2.1
General Structure
2.2.2
Project Folder Structure
2.2.3
Data Storage
2.3
GitHub Structure
2.3.1
Project Repository Structure
2.3.2
A repo inside a repo (a good thing to have)
3
Data
3.1
Data File Naming
3.2
Metadata
3.2.1
Metadata Standards
3.2.2
Where to Store Metadata
3.3
Data Directory
3.3.1
Data Directory
3.3.2
Project-level Data Directory
3.4
Tidy Data
3.4.1
Recommended Resources
3.5
Data Formats
3.6
Data Use Agreements and Confidential Data
3.6.1
The process for establishing a Data Use Agreement or Non-Disclosure Agreement
3.6.2
Data storage options
3.6.3
Other best practices
4
Code
4.1
Scripts and Version Control
4.2
Style Guide
4.3
Reproducibility
4.4
Coding pipelines
4.5
Internal code review
4.6
Exploratory Data Analysis
5
High Performance Computing
5.1
Google Cloud Platform
5.1.1
Connecting to
’s Shared Drive
5.2
Eddie Server Clusters
6
Reports and Publications
6.1
Affiliation
6.2
Reports
6.3
Author Contribution
6.4
Making Your Data Publicly Available
6.5
Preparing a Public GitHub Repository
6.5.1
Documentation
6.5.2
Sanitizing the repository
6.6
Sharing public data, Shiny apps, and tools on our website
’s New Starter
6
Reports and Publications
This section describes best practices related to
reports and publications.